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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FH10_ARATH
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.39
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGLCYVIFI IFSLLSCAFS PLSYASPATF SRRHLLQAPV TDPSTFSPPF FPLYSSTSPP  60
   61 PPPSPPQPLP PPAPTFATFP ANISALVLPR SPKPQTPSRT LLIPAISAVL AAATLIALAF 120
  121 FFYGRWRGQT SHFKDESKSL ASDISQSQQQ TLPCPPPRNN NTQNKLSVAP STSDVLYLGN 180
  181 VVTSSGSGFV KPESPDISPL PPLPARSFLL QHHSEANLDE EEEDDDFYSP LASIAGQESR 240
  241 DRRINPYSNC SCSISSHSDS PAMSPSAAMS PPMNSTAPHW STNQNTHSPS SPERTVRNNK 300
  301 RYGGQSLRMF SLWNQNLGFP RISSASTSPE RGMIRTPDAY ARSSMYSSVS TTPDRFFRKV 360
  361 LDSSPPRWND FSRNVKSLFL SSTSASPARD FCINISESSR SLKSSWEKPE LDTTQQRESA 420
  421 AAAVTLPPPQ RPPPAMPEPP PLVPPSQSFM VQKSGKKLSF SELPQSCGEG TTDRPKPKLK 480
  481 PLPWDKVRPS SRRTNTWDRL PYNSSNANSK QRSLSCDLPM LNQESKVLDP RKSQNVAVLL 540
  541 TTLKLTTNDV CQALRDGHYD ALGVELLESL ARVAPSEEEE KKLISYSDDS VIKLAPSERF 600
  601 LKELLNVPFV FKRVDALLSV ASFDSKVKHL KRSFSVIQAA CEALRNSRML LRLVGATLEA 660
  661 GMKSGNAHDF KLEALLGLVD IKSSDGRTSI LDSVVQKITE SEGIKGLQVV RNLSSVLNDA 720
  721 KKSAELDYGV VRMNVSKLYE EVQKISEVLR LCEETGHSEE HQWWKFRESV TRFLETAAEE 780
  781 IKKIEREEGS TLFAVKKITE YFHVDPAKEE AQLLKVFVIV RDFLKILEGV CKKMEVTSSL 840
  841 A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle