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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149058687
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQDAPAKPR EQKVTSLRTK WKILLLILCL LHGSSMTPPH RRPHSRWLQS GSQQFRAHLY  60
   61 SVEAHTVATT LCCWKNSLSG ANALRGPKLV SGETGGTVTI RCHYAPTSVN RHQRKYWCRL 120
  121 GPPLWICYTV VSTNQYTHHD YRGRVALTDV PQSGLFMVRL LQLSLGDTGL YRCGIGDRND 180
  181 MLFFSVNLTV SAGPSNTTYA AAPASSEPIT ASPGTASSAA NRWTSGVTQV LEGRGSEWDR 240
  241 SAPTPDTSKT TSSANGRQTL TTARTMVPRT SSREEGSVKV AVSTPEGPAP KSGSLFSTTQ 300
  301 GVWVWSTRNS VTTGATTSEG RKQGTTPETD GPREETNVST SPNAPRKTTG TTRPSVLISE 360
  361 HGTWETLQDE TKVSKQQMLY SPEGSSPAPS AQTLNATCME AAPGEGRTDG SLGNTTEESS 420
  421 PLTPSQLSAA GPMWVSGKGS SMKSTFTERE SDSRILTPVS IVLALLLIAA LVLLKRRLGG 480
  481 ERTSQKTERV PRITLIQMTH FLPDKLPGEG KNLQQSDLPT QASLTVLEKD PGL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle