YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MPPE1_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALVRWGLRR QNFHLLRRRR VLLLKLTVVV ISVLLFCEYF IYYLVLFRCH WPEVKMPARG  60
   61 GRQEPVLKAM FLADTHLLGE IRGHWLDKLR REWQMERAFQ TALWLLQPEV VFILGDVFDE 120
  121 GKWSSAQAWA DDLHRFQRMF RHGSHVQLKV VIGNHDIGFH YQMSKYRINR FEKVFGSERL 180
  181 FSLKGVNFVM VNSVAMEGDG CTICSEAEAE LREISRKLNC SQEQVQGSSQ CDHEPRLPLS 240
  241 APVLLQHYPL YRASDANCSG EDAAPPEERS VPFEEKYDVL SREASQKLLW WLRPRLILSG 300
  301 HTHSACEVLH PGGAPEVSVP SFSWRNRNNP SFIMGSLTSR DYALSKCYLP CEDTVLTTYC 360
  361 AAAAFLLVLI LAHFERLPSS FLFGWKLCRS HLRR

Type	Start	End	Confidence
Cytoplasmic	1	20	0.99
Transmembrane Helix	21	43	0.97
Non-Cytoplasmic	44	354	0.86
Transmembrane Helix	355	374	0.69
Cytoplasmic	375	394	0.54