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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CESA9_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTGGRLIAG SHNRNEFVLI NADDTARIRS AEELSGQTCK ICRDEIELTD NGEPFIACNE  60
   61 CAFPTCRPCY EYERREGNQA CPQCGTRYKR IKGSPRVEGD EEDDDIDDLE HEFYGMDPEH 120
  121 VTEAALYYMR LNTGRGTDEV SHLYSASPGS EVPLLTYCDE DSDMYSDRHA LIVPPSTGLG 180
  181 NRVHHVPFTD SFASIHTRPM VPQKDLTVYG YGSVAWKDRM EVWKKQQIEK LQVVKNERVN 240
  241 DGDGDGFIVD ELDDPGLPMM DEGRQPLSRK LPIRSSRINP YRMLIFCRLA ILGLFFHYRI 300
  301 LHPVNDAFGL WLTSVICEIW FAVSWILDQF PKWYPIERET YLDRLSLRYE KEGKPSELAP 360
  361 VDVFVSTVDP LKEPPLITAN TVLSILAVDY PVEKVACYVS DDGAAMLTFE ALSYTAEFAR 420
  421 KWVPFCKKFS IEPRAPEWYF SQKMDYLKHK VDPAFVMERR AMKRDYEEFK VKINALVSVS 480
  481 QKVPEDGWTM QDGTPWPGNN VRDHPGMIQV FLGHSGVCDM DGNELPRLVY VSREKRPGFD 540
  541 HHKKAGAMNS LIRVSAVLSN APYLLNVDCD HYINNSKAIR EAMCFMMDPQ SGKKICYVQF 600
  601 PQRFDGIDRH DRYSNRNVVF FDINMKGLDG IQGPIYVGTG CVFRRQALYG FDAPKKKQPP 660
  661 GRTCNCWPKW CCLCCGMRKK KTGKVKDNQR KKPKETSKQI HALEHIEEGL QVTNAENNSE 720
  721 TAQLKLEKKF GQSPVLVAST LLLNGGVPSN VNPASLLRES IQVISCGYEE KTEWGKEIGW 780
  781 IYGSVTEDIL TGFKMHCHGW RSVYCMPKRA AFKGSAPINL SDRLHQVLRW ALGSVEIFLS 840
  841 RHCPIWYGYG GGLKWLERFS YINSVVYPWT SLPLLVYCSL PAICLLTGKF IVPEISNYAG 900
  901 ILFLLMFMSI AVTGILEMQW GKIGIDDWWR NEQFWVIGGV SSHLFALFQG LLKVLAGVST 960
  961 NFTVTSKAAD DGEFSELYIF KWTSLLIPPT TLLIINIVGV IVGVSDAINN GYDSWGPLFG1020
 1021 RLFFALWVIV HLYPFLKGLL GKQDRVPTII LVWSILLASI LTLLWVRVNP FVSKDGPVLE1080
 1081 ICGLDCLK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle