YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42562835, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITRESLTLR SITMMTLVTI LVWSATLETC IARRGRHWRH HHRSSSSLSD SLSSKKPKSH  60
   61 ENNHHHMSHK SKPKPKMKTQ PPKSNDGSPV VSQPPQVQQP PPPHVQPPPT PLPLQPVEDS 120
  121 QQFNVLDFGA KGDGMSDDTQ AFEAAWASAC KVEASTMIIP PDYIFLVGPI SFSGPYCQAN 180
  181 IVFQLEGMIV APTDTESWGG GLMWWIEFTK LSGITIQGNG VIDGRGTVWW QQDYLSDYPI 240
  241 DDDFKLIVPL NNSVQERPPM PIRSELNWRM PSIKPTALRF YGSIDVTVTG ITIQNSPQCH 300
  301 LKFDNCVKVL VHDVNVSSPG DSPNTDGIHL QNTRDVMIHT TTLACGDDCI SIQTGCSNVY 360
  361 VHNVNCGPGH GISIGSLGKD STKACVSNIT VRDVVMHNTM TGVRIKTWQG GIGSVKGILF 420
  421 SNIQLTEVQL PIVIDQFYCD HSKCMNHTSA VSVEGVTYEK IRGTYTVKPV HFACSDSFPC 480
  481 IDVQLSGIEL KPVQLQYHMY DPFCWKTFGE LNSATVPPID CLQIGKPARN GVHSDHDICL 540
  541 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle