YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7485329, gi\|7...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVLRILSRV TRNAGIRSSL SAVTLPARNQ TPLVPAQMSM MDSFALQRFN FSSSTSPESD  60
   61 EKKTHTEASK TSEEKPTAEA NQPGLDSESK DSVTDSAKRK RKGAKGAASS SSESDSESDD 120
  121 DELSADDLVK LVAEKEELLS EKEEEIKQLK DKVLRTYAEM ENVMDRTRRD AENTKKYAVQ 180
  181 NFAKSLLDVA DNLGRASSVV KESFSKLDTS EDSAGAAPLL KTLLEGVEMT EKQLAEVFKK 240
  241 FGMEKYDPIN EPFDPNRHNA VFQVPDASKP EGTVAHVLKS GYTLYDRVIR PAEVGVTQGG 300
  301 ENQEEKKESD A

Type	Start	End	Confidence
Signal Peptide	1	36	0.65
N-region	1	27
H-region	28	33
C-region	34	36
Cleavage Site	36	37
Non-Cytoplasmic	37	311	0.99