YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30696750, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNILSQTQIL HLSIAILLFI TTSSSSLSPS SSSPSLSPSP PSSSPSSAPP SSLSPSSPPP  60
   61 LSLSPSSPPP PPPSSSPLSS LSPSLSPSPP SSSPSSAPPS SLSPSSPPPL SLSPSSPPPP 120
  121 PPSSSPLSSL SPSSSSSTYS NQTNLDYIKT SCNITLYKTI CYNSLSPYAS TIRSNPQKLA 180
  181 VIALNLTLSS AKSASKFVKN ISHGGGLTRL EVVAVADCVE EIGDSVTSLQ DSIRELDSIN 240
  241 YKDSAKFEMV MSDVETWVSA ALTNDDTCMD GFSLVKTAVK DLVRRHVVEV ARLTSNALAL 300
  301 INMYASTQEN FS

Type	Start	End	Confidence
Signal Peptide	1	32	0.83
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	312	0.99