YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157819371, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGASFGAGR AGAAFDPVSF AQRPQTLLRV VSWVFSIAVF GPIVNEGYVN SDSGPELRCV  60
   61 FNGNAGACRF GVVLGLGAFI ACVAFLLLDV RFQQISSVRD RRRAVLLDLG FSGVWSFLWF 120
  121 VGFCFLTNQW QRTAPGPGTA QAGDAARAAI AFSFFSILSW VALTVKALQR FRLGTDMSLF 180
  181 ATDQLGLGTC PSVRHSLGN

Type	Start	End	Confidence
Cytoplasmic	1	26	0.96
Transmembrane Helix	27	45	0.91
Non-Cytoplasmic	46	66	0.88
Transmembrane Helix	67	88	0.91
Cytoplasmic	89	104	0.88
Transmembrane Helix	105	127	0.90
Non-Cytoplasmic	128	144	0.93
Transmembrane Helix	145	165	0.92
Cytoplasmic	166	199	0.93