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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149050132, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMCAATASP AAASSGPGGD GFFAAATISS SPAPGALFMP VPDGSVAASG LGLGLPATDS  60
   61 RGQYQLLLSG RALADRYRRI YTTALSDRDQ AGSSTGYPAS RNKKILNKKK LKRKQKSKSK 120
  121 VKTRSKSENL ENTVIIPDIK LHSNPSAFNI YCNVRHCVLE WQKKEASLAA ASRNSVQSGE 180
  181 SDSDEEEESR ELPIKLPKII EVGLCEVFEL IKETRFSHPS LCLRSLQALL NVLQGQQPEG 240
  241 LQSEPPEVLE SLFQLLLEIT VRSTGVNDST GQSLTALSCA CLFSLVASWG ETGRTLQAIS 300
  301 AILTNNGSHA CQTIQVPTIL NSLQRSVQAV LVGKIQVQDW FSNGIKKAAL MHKWPLKEIS 360
  361 VDEDDQCLLQ NDGFFLYLLC KDGLYKIGSG YSGTVRGYLL YRDVNNHSMT AIRISPETLE 420
  421 QDGTVMLPDC HTEGQNILFT DGEYINQIAA SRDDGFVVRI FATSTEPVLQ QELQLKLARK 480
  481 CLHACGISLF DLEKDLHIIS TGFDEESAIL GAGREFALMK TANGKIYYTG KYQSLGIKQG 540
  541 GPSAGKWVEL PITKSPKIVH FSVGHDGSHA LLVAEDGSVF FTGSASKGED GESAKSRRQS 600
  601 KPYKPKKIIK MEGKIVVCTA CNNGSSSVIS KDGELYMFGK DAIYSDSSSL VSDLKGHFVT 660
  661 QVAMGKAHTC VLMKNGEVWT FGVNNKGQCG RDTGAMNQGG KGFGVENMAT AMDEDLEEEL 720
  721 DEKDEKSMMC PPGMHKWKLE QCMVCTVCGD CTGYGASCVS SGRPDRVPGG ICGCGSGESG 780
  781 CAVCGCCKAC ARELDGQEAR QRGILDAVKE MIPLDLLLAV PVPGVNIEEH LQLRQEEKRQ 840
  841 RVIRRHRLED GRGPLVFAGP IFMNHREQAL ARLRSHPAQL KHKRDKHKDA SGERGEKDAS 900
  901 KVTTYPPGSV RFDCEVRAVQ VSCGFHHSVV LMENGDVYTF GYGQHGQLGH GDVNSRGCPT 960
  961 LVQALPGPST QVTAGSNHTA VLVMDGQVFT FGSFSKGQLG RPILDVPYWN AKPAPMPNIG1020
 1021 SKYGRKATWI GASGDQTFLR IDEALINSHV LATSEIFASK HIIEPPPFKC LLINKVDGSC1080
 1081 KTFNDSEQED LQGFGVCLDP VYDVLWRFRP STRELWCYNA VVADARLPSA TDMQSSCCIL1140
 1141 SPELALPTGS RALTTRSHAA LHILGCLDTL AAMQDLKMGI ASIEEETQAV MKVYSKEDYS1200
 1201 IVNRFESHGG GWGYSAHSVE AIRFSADTDI LLGGLGLFGG RGEYTAKIKL FELGPDGGDH1260
 1261 ETDGDLLAET DVLAYDCAAR EKYAMMFDEP VLLQAGWWYV AWARVSGPSS DCGSHGQASI1320
 1321 TTDDGVIFQF KSSKKSNNGT DVNAGQIPQL LYRLPTCDGS TSKGKQQTSE PVHILKRSFA1380
 1381 RTVSVECFES LLSILHWSWT TLVLGVEELR GLKGFQFTAT LLDLERLRFV GTCCLRLLRV1440
 1441 YTCEIYPVSA VGKAVVEETS KLAECIGKTR TLLRKILSEG VDHCMVKLDN DPQGYLSQPL1500
 1501 SLLESVLQEC HNTFTACFHS FYPTPALQWA CLCDLLNCLD QDIQEANFKT SSSRLLAAVM1560
 1561 SALCHTSVKL TSLFPIAYDG EVLLRSIVKQ VSTENESTLV HRFPLLVGHM EKLSQSEENI1620
 1621 SGMTSFREVL EKMLVIVVLP VRNSLRRESE LFSSHLVSNT CGLLASIVSE LTASALGSEV1680
 1681 DGLNSLHSVK ASANRFTKTS QGRSWNTGNG SPDAICFAVD KPGIVVVGFS VYGGGGIHEY1740
 1741 ELEVLVDDSE HSGDSTHSHR WTSLELVKGT YTTDDSPSDI AEIRLDKVVP LKENVKYAVR1800
 1801 LRNYGSRTAN GDGGMTTVQC PDGVTFTFST CSLSSNGTNQ TRGQIPQILY YRSEFDGDLQ1860
 1861 SQLVSKANEE DKNCSRALSV VSTVVRAAKD LLHRALAVDA YIGPVAAAIP KVAVEVFGLV1920
 1921 QQLLPSVAVL NQKYAPPAFN PNQSTDSTTG NQPEQGLSAC TTSNHYAVIE TSPLVYWQVT1980
 1981 FPECVRWMTI EFDPQCGTAQ SEDVLRLLTP VRTIQNAGYG AKVTSAHENL NSWIELKKYS2040
 2041 GSSGWPTMVL VLPGNEALFS LETASDYVKD DKASFYGFKC FAIGYEFSPG PDEGVIQLEK2100
 2101 ELANLGGVCA AALMKKDLAL PIGNELEEDL EILEEAALQV CKTHSGILGK GLALSHSPTI2160
 2161 LEALEGNLPL QIQSNEQSFL DDFIACVPGS SGGRLARWLQ PDSYADPQKT SLILNKDDIR2220
 2221 CGWPTTITVQ TKDQYGDVVH VPNMKVEVKA VPVSQKKTSL QQEQVKKSQR VPGSPAAAAA2280
 2281 ASCTTDMTFG GLASPKLDVS YEPMIVKEAR YIAITMMKVY ENYSFEELRF ASPTPKRPSE2340
 2341 NMLIRVNNDG TYCANWTPGA IGLYTVHVTI DGIEIDAGLE VKVKDPPKGM IPPGTQLVKP2400
 2401 KADPQPNKIR KFVAKDSAGL RIRSHPSLQS EQIGIVKVNG TITFIDEIHN DDGVWLRLNE2460
 2461 ETIRKYVPNM NGYTEAWCLS FNQHLGKSLL VPVDEPKTTT DDFFKDVNTC CPQEAAVRER2520
 2521 DHPFLREQVL LDQNSQTPPP SPFSVQAFSK GASCSAQGFD YGLGNNKVLI VLPTAGDQLS2580
 2581 AILNSIQSRP NLPAPSIFDQ AAKPPSSLVH SPFVFGQPLS FQQRQLQIHY DMQVTEELSQ2640
 2641 HLQDQCLHQQ SQSCPPRTAD QLNLMGV

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