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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109946411, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.84
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAIMKSLCF SFLILASFAT FFSVADAWRF NVGGNGAWVT NPQENYNTWA ERNRFQVNDS  60
   61 LYFKYAKGSD SVQQVMKADF DGCNVRNPIK NFENGESVVT LDRSGAFYFI SGNQDHCQKG 120
  121 QKLIVVVLAV RNQPSAPAHS PVPSVSPTQP PKSHSPVSPV APASAPSKSQ PPRSSVSPAQ 180
  181 PPKSSSPISH TPALSPSHAT SHSPATPSPS PKSPSPVSHS PSHSPAHTPS HSPAHTPSHS 240
  241 PAHAPSHSPA HAPSHSPAHA PSHSPAHSPS HSPATPKSPS PSSSPAQSPA TPSPMTPQSP 300
  301 SPVSSPSPDQ SAAPSDQSTP LAPSPSETTP TADNITAPAP SPRTNSASGL AVTSVMSTLF 360
  361 SATFTFLMFA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle