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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CESA2_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTGGRLIAG SHNRNEFVLI NADESARIRS VQELSGQTCQ ICGDEIELTV SSELFVACNE  60
   61 CAFPVCRPCY EYERREGNQA CPQCKTRYKR IKGSPRVDGD DEEEEDIDDL EYEFDHGMDP 120
  121 EHAAEAALSS RLNTGRGGLD SAPPGSQIPL LTYCDEDADM YSDRHALIVP PSTGYGNRVY 180
  181 PAPFTDSSAP PQARSMVPQK DIAEYGYGSV AWKDRMEVWK RRQGEKLQVI KHEGGNNGRG 240
  241 SNDDDELDDP DMPMMDEGRQ PLSRKLPIRS SRINPYRMLI LCRLAILGLF FHYRILHPVN 300
  301 DAYGLWLTSV ICEIWFAVSW ILDQFPKWYP IERETYLDRL SLRYEKEGKP SGLAPVDVFV 360
  361 STVDPLKEPP LITANTVLSI LAVDYPVDKV ACYVSDDGAA MLTFEALSDT AEFARKWVPF 420
  421 CKKFNIEPRA PEWYFSQKMD YLKNKVHPAF VRERRAMKRD YEEFKVKINA LVATAQKVPE 480
  481 EGWTMQDGTP WPGNNVRDHP GMIQVFLGHS GVRDTDGNEL PRLVYVSREK RPGFDHHKKA 540
  541 GAMNSLIRVS AVLSNAPYLL NVDCDHYINN SKAIRESMCF MMDPQSGKKV CYVQFPQRFD 600
  601 GIDRHDRYSN RNVVFFDINM KGLDGIQGPI YVGTGCVFRR QALYGFDAPK KKKPPGKTCN 660
  661 CWPKWCCLCC GLRKKSKTKA KDKKTNTKET SKQIHALENV DEGVIVPVSN VEKRSEATQL 720
  721 KLEKKFGQSP VFVASAVLQN GGVPRNASPA CLLREAIQVI SCGYEDKTEW GKEIGWIYGS 780
  781 VTEDILTGFK MHCHGWRSVY CMPKRAAFKG SAPINLSDRL HQVLRWALGS VEIFLSRHCP 840
  841 IWYGYGGGLK WLERFSYINS VVYPWTSLPL IVYCSLPAVC LLTGKFIVPE ISNYAGILFM 900
  901 LMFISIAVTG ILEMQWGGVG IDDWWRNEQF WVIGGASSHL FALFQGLLKV LAGVNTNFTV 960
  961 TSKAADDGAF SELYIFKWTT LLIPPTTLLI INIIGVIVGV SDAISNGYDS WGPLFGRLFF1020
 1021 ALWVIVHLYP FLKGMLGKQD KMPTIIVVWS ILLASILTLL WVRVNPFVAK GGPVLEICGL1080
 1081 NCGN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle