YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4803933, gi\|2...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKEEYVSRM LVMLIMIMPL VAQGSRLHSW ANRLEETGKD KVTNLQFYFH DTLSGKNPTA  60
   61 VKVAQGTDTE KSPTLFGAVF MVDDALTETA DPKSKLVGRA QGLYGSSCKE EVGLIMAMSF 120
  121 CFEDGPYKDS TISMIGKNSA MNPIREMPIV GGTGMFRMAR GYAIARTNWF DPKTGDAIVG 180
  181 YNGSSIFELQ AEEKKQNKSK SGQETGEKAG KRRQKKARRN KKENILLSGD KPATTAKSSR 240
  241 SMPEAEPVNA SKEASDAGGE ADQTPLIKPV IVGQKN

Type	Start	End	Confidence
Signal Peptide	1	24	0.75
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	276	0.98