YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15237373, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKSEKIAYA SVLSLLSLSL LLLIIFLFLL CRKKPNRSDD EYLLPETKPA GLSYSLTELD  60
   61 SATDGFNQRR IIGSGRLGTV YAAIIPDHKN LVAVKRIHPG LVLSKPGFGF STVIKSLSSS 120
  121 HHPNVVSILG FSEAPGERIV VTEFVGEGKS LSDHLHGGSN SATAVEFGWK TRFKIAAGAA 180
  181 RGLEYLHEIA NPRIVHGRFT SSNVLVDEKS TAKICDYGFG FLIPIEKSGI FGYIEEGYCK 240
  241 ESDVYGYGVV LMEILSGRRS ENGLIVKWAT PLIKEQRFAE LLDPRIVVQS EIKSLVIRLA 300
  301 KVALACVGNS RRSRPSISEV AAILNSLERE GG

Type	Start	End	Confidence
Signal Peptide	1	31	0.51
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	332	0.91