YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GT29A_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRSVRPLFS ALLFAFFAAT LICRVAIRRS SFSFASAIAE LGSSGLMTED IVFNETLLEF  60
   61 AAIDPGEPNF KQEVDLISDY DHTRRSHRRH FSSMSIRPSE QQRRVSRDIA SSSKFPVTLR 120
  121 SSQAYRYWSE FKRNLRLWAR RRAYEPNIML DLIRLVKNPI DVHNGVVSIS SERYLSCAVV 180
  181 GNSGTLLNSQ YGDLIDKHEI VIRLNNAKTE RFEKKVGSKT NISFINSNIL HQCGRRESCY 240
  241 CHPYGETVPI VMYICQPIHV LDYTLCKPSH RAPLLITDPR FDVMCARIVK YYSVKKFLEE 300
  301 KKAKGFVDWS KDHEGSLFHY SSGMQAVMLA VGICEKVSVF GFGKLNSTKH HYHTNQKAEL 360
  361 KLHDYEAEYR LYRDLENSPR AIPFLPKEFK IPLVQVYH

Type	Start	End	Confidence
Signal Peptide	1	26	0.92
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	398	0.99