YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149054534
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLQFYEQTA RVVLNELMEA TWNYVTNITK QNQENMLQKE VERSQFMLYF GTRARMFRID  60
   61 HFQDLDVKRR LSKLRNIDKS ALPVEDFQEF NRLLTYMKTA YGRAEVCLDE GPCMPLEPDL 120
  121 EEIMATSRDQ KELLWAWQGW RDAIGRQLRP VFEDYVHLSN KAAQYNGYKD MGALWRSKYE 180
  181 SDTLEEDLEQ LYKELQPLYL NLHAYVRRSL YRYYGPELID LRGPIPAHLL GNMWAQSWNN 240
  241 ILDLVLPYPN KPPEDITKIM KNQHWRPEKM FEEANLFFTS MGMLPAPPAF WMKSMMEKPV 300
  301 DGREVECHTS SWNFYRLNDF RVKKCTEVTI GDLLSIFHQM GHIQYYLQCQ NLSIIYQEGA 360
  361 SPAFEEAVGS TITLSAFSHK YLLTRGLLSQ QHQDSEEEVN FLLSIALEKI AFIPFGYMID 420
  421 LFRWKVFDGT IQKNAYNQEW WSLRLKYQGL CPPVPRSEDD FDPGAKFHIP ANMPYIRYFL 480
  481 SLVLQFQLHE VLCRASGHVG PLHRCDIYNS KVAGKILGDF LKVGSSRPWQ EVLKEITGKP 540
  541 NISTKALLTY FKPLLNWLVT ENVKQGDILG WPDFSCSFEE KITKKMSFLG MKIEPDQAYL 600
  601 GQWVLLSMSF IMLCLILALG LRLHYLERRS LDSDTVILST PPYAYFLGIA MEPRQAARKQ 660
  661 WLLLGLCFVL MLCCIGLLIK IFIHHTRKPP WMKAEWQS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle