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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9759607, gi|1...
Protein type: Transmembrane
Type Confidence: 0.63
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATLSSSSSV ELPPQHTVFI LYNGSRMGFI YHLIMALEKK NINVFVGFNG CICEPVERLS  60
   61 NRIESIIVLV IFTSRYTESK WCLMKLVDIN KCAEKDHLVA IPIFYKLDPS TVRGLSGQFG 120
  121 DAFRDLREST GLMEKWKEAL KSISDRPGIR VDKSSPKAKR IEIVVKKVLS RIPSEGSHNA 180
  181 SVDPLENSDT RLTSSGEENR TFGIKERLKE FKDKLDLNKM RSQLGMVIGC LLVLFFVLKQ 240
  241 SAYTSTRLIG EGGAIGAISA IDRIADNVPK IREYVPEEGT EKPRDTYTEF HTGKYGTKPE 300
  301 RSSSDVKTNA DLLDRTFTDT RMDGKVKPPK FQVFINFRGD QLRNNFVGYL VDALRRSEIN 360
  361 VFIDNQEQRG EDLNTLFKRI EDSGIAIVVF SSRYTESKWC LEELVKIKER VHQGLLKVLP 420
  421 IFYKVTPTNV KRPKGEFGDH FRDKEYMYES DEPMIKRWKE AIVFISHRFA LTLDEKSSSE 480
  481 MLDTSLHMYV HARVWNLKEL ISTFLTKCSS ALEIDFVETI VKEVLKILQA ICKVESSQSS 540
  541 FCAEKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle