YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATL45_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRSSRFLGT ASPPPPEEIL AAETDMVVIL SALLCALVCV AGLAAVARCA WLRRLTGVNP  60
   61 AAVGEAPPPN KGLKKKALQA LPKSTYTASA STAAAADDLP CSSVGDGDSS TECAICITEF 120
  121 SEGEEIRILP LCSHAFHVAC IDKWLTSRSS CPSCRRILVP VKCDRCGHHA STAETQVKDQ 180
  181 PPHHQHPSQF TSAIIPAFLP

Type	Start	End	Confidence
Signal Peptide	1	49	0.46
N-region	1	40
H-region	41	46
C-region	47	49
Cleavage Site	49	50
Non-Cytoplasmic	50	200	0.59