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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: C85A1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAMMVMMGL LLIIVSLCSA LLRWNQMRYT KNGLPPGTMG WPIFGETTEF LKQGPNFMRN  60
   61 QRLRYGSFFK SHLLGCPTLI SMDSEVNRYI LKNESKGLVP GYPQSMLDIL GTCNMAAVHG 120
  121 SSHRLMRGSL LSLISSTMMR DHILPKVDHF MRSYLDQWNE LEVIDIQDKT KHMAFLSSLT 180
  181 QIAGNLRKPF VEEFKTAFFK LVVGTLSVPI DLPGTNYRCG IQARNNIDRL LRELMQERRD 240
  241 SGETFTDMLG YLMKKEGNRY PLTDEEIRDQ VVTILYSGYE TVSTTSMMAL KYLHDHPKAL 300
  301 QELRAEHLAF RERKRQDEPL GLEDVKSMKF TRAVIYETSR LATIVNGVLR KTTRDLEING 360
  361 YLIPKGWRIY VYTREINYDA NLYEDPLIFN PWRWMKKSLE SQNSCFVFGG GTRLCPGKEL 420
  421 GIVEISSFLH YFVTRYRWEE IGGDELMVFP RVFAPKGFHL RISPY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle