YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|8809618, gi\|2...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKGLTMSCV LVVVAFLAMV HVSVSVPFVV FPEIGTQCSD APNANFTQLL SNLSSSPGFC  60
   61 IEIGEGNPIG ASWLIPLTQQ AEVACDKVTQ MEELSQGYNI VGRAQGSLVA RGLIEFCEGG 120
  121 PPVHNYISLA GPHAGTADLL RCNTSGLICD IANGIGKENP YSDFVQDNLA PSGYFKNPKN 180
  181 VTGYLKDCQY LPKLNNERPY ERNTTYKDRF ASLQNLVFVL FENDTVIVPK ESSWFGFYPD 240
  241 GDLTHVLPVQ ETKLYIEDWI GLKALVVAGK VQFVNVTGDH LIMADEDLVK YVVPLLQDQQ 300
  301 SAPPRLNRKT KEPLHP

Type	Start	End	Confidence
Signal Peptide	1	25	0.80
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	316	0.99