YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157819529, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGHVGCMNPG AGEESRLGHR SRATALLRPP RSIHLSLLLP AVTGVPSPRA TDPPSHLDGP  60
   61 PAVAVGQCPL VGPGPMHRRH LLFPARVPRP GLSEAHCLLL FAAALAAAAT LGCTGLVAYT 120
  121 GRLTPVWCFS GATFAP

Type	Start	End	Confidence
Cytoplasmic	1	96	0.78
Transmembrane Helix	97	119	0.94
Non-Cytoplasmic	120	136	0.85