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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AATPG_ARATH
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFSRDIPSP ASMFSTYASM MGYVMIIKPM INTIIPRPVQ NFVFSYLKSF AGSRSSTLTL  60
   61 TIDQMSSMYI PDELYAAAQA YLSTKISPNS VRLIMARDPA EKKVKLYLSD GEVVSDVYNG 120
  121 IKLKWRFLAR NKNNTMVEEY GQSYQGNIQR ESLELSFDKK HRDLVVNSYI PYVESKAKEV 180
  181 NNKRRILKMH CYSHMAQTWQ SVNFKHPSTF DTMAMNDDLK RSMIEDLDRF VGRKDFYKRV 240
  241 GKAWKRGYLL YGPPGTGKSS LVAAMANYLK FDIYDLQLAS VQGDAHLRSL LLATNNSSIL 300
  301 LIEDIDCSVD LPTRLQPPTE TSQPLGAVQV SKPLTLSGLL NCIDGLWSSC GNERIIIFTT 360
  361 NNKEKLDPAL LRPGRMDMHI YMGHCSFQGF KTLASNYLGL SDENDDTHPL CPDIKHLIDG 420
  421 HVLTPAQVAE ELMKDEDADA ALEGLVKVLK RKRLEPKKCD DESKMKKLKE GEEAIADAEL 480
  481 AVLTPAQVED KEELVASEYA NVMPEWLPRS RLVMVLPGFH RARGIRRGLG DEM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle