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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149049932, gi...
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMAEHPPLLD TAQILSSDIS LLSAPIVSAD GTQQVILVQV NPGEAFTIRR EDGQFQCITG  60
   61 PAQVPMMSPN GSVPPIYVPP GYAPQVIEDN GVRRVVVVPQ SPEFHPGGHT VIHRSPHPPL 120
  121 PGFIPVPTMM PPPPRHMYSP VTGAGDMATQ YMPQYQSSQV YADVDPFGEC DLFNTCVLLL 180
  181 LDAHSTHGRS NFRDERSTKT YERLQKKLKD RQGTQKDKMS SPPPSPQKCP SPISEHNGLI 240
  241 KGQNTSGVNT GSARNRSGRG RGCTQVDQEI EEKDEETKAF EAFLSNIVRP VASDIQARTV 300
  301 LLTWSPPSSF VNGEVTETTV PEFFNYEILV SSTGKEGKYR SVYVVQAESN SIKGIPSEAE 360
  361 SFTTLSCEPD TPNAPRIANR TKNSLTLQWK GKGSGEFCQC YMGSQKQFKI TKLSPAMGCK 420
  421 FRLSAKNDYG VSDFSEEVLY YTSGCAPSVP ASPVLTKAGV TWLSLQWTKP SGTPSDEGIS 480
  481 YILEMEEETS GYGFKPKYDG EDLAYTVKNL RRSTKYKFKV IAYNSEGKSS PSEVVEFSTC 540
  541 PDKPGVPAKP SVKGKVHSHG FKITWDPPRD NGGAPINKYV VEMAEGSNGS KWDMIYSGAT 600
  601 REHLCDRLTP GCYYRLRVYC ISDGGQSATP AVPPGPCLPP RLQGRPKAKE IQLRWGPPQV 660
  661 DGGSPISCYA VEMTPADKDE PRDVYQGSEV ECTVSSLLPG KTYSFRLRAA NRIGFGPFSE 720
  721 KYDITTAPGP PDQCRPPQVT CRSATCAQVN WEIPLSNGTD ITEYRLEWGG VEGSMQICYC 780
  781 GPGLSCELKG LSPATTYYCR VQALSVVGAG PFSEVVACVT PPSVPAIVTC LQEIRDDDIE 840
  841 YPHYSPSTCL AISWEEPYDH GSEILAYSID LGDKQPLTVG KVTSYVINSL QPDTTYRIRI 900
  901 QALNSLGAGP FSHTIKLKTK PLPPDPPRLE CVAFNHQNLK LKWGEGTPKT LATDAVQYHL 960
  961 QMEDKNGRFV SLYRGPCHTY KVQRLSESTS YKFCIQACNE AGEGPLSQEY VFTTPKSVPA1020
 1021 ALKAPKIEKI NDHICEITWE YLQPMKGDPV IYNLQVMVGK DSEFKQIYRG PDTSFRYSSL1080
 1081 QLNCEYRFRV CAIRQCQDPA GHQDLVGPYS TTVFFISQRT EPLASSNRDT VDSARTRRTL1140
 1141 SDEQCAAVIL VLFAFFSILI AFIIQYFVIK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle