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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FH6_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKALQSRFFF FFFFYIFFSV SVSSEAHRRI LHQPLFPESS TPPPPDFQST PSPPLPDTPD  60
   61 QPFFPENPST PQQTLFPPPP PPVSADVNGG LPIPTATTQS AKPGKKVAIV ISVGIVTLGM 120
  121 LSALAFFLYR HKAKHASDTQ KLVTGGGDGG GSRRFQEDSG PPTTTSSTFL YMGTVEPTRV 180
  181 SASESNGGTN GPVNSSPYRK LNSAKRSERY RPSPELQPLP PLAKPPQPSD NSPSALSPSS 240
  241 SSSGEECRDT AFYTPHGSAI SSDDGYYTAF PRSANGSLPH SKRTSPRSKF GSAPTTAASR 300
  301 SPEMKHVIIP SIKQKLPPPV QPPPLRGLES DEQELPYSQN KPKFSQPPPP PNRAAFQAIT 360
  361 QEKSPVPPPR RSPPPLQTPP PPPPPPPLAP PPPPQKRPRD FQMLRKVTNS EATTNSTTSP 420
  421 SRKQAFKTPS PKTKAVEEVN SVSAGSLEKS GDGDTDPSKP KLKPLHWDKV RASSDRATVW 480
  481 DQLKSSSFQL NEDRMEHLFG CNSGSSAPKE PVRRSVIPLA ENENRVLDPK KSQNIAILLR 540
  541 ALNVTREEVS EALTDGNPES LGAELLETLV KMAPTKEEEI KLREYSGDVS KLGTAERFLK 600
  601 TILDIPFAFK RVEAMLYRAN FDAEVKYLRN SFQTLEEASL ELKASRLFLK LLEAVLMTGN 660
  661 RMNVGTNRGD AIAFKLDTLL KLVDIKGVDG KTTLLHFVVQ EITRSEGTTT TKDETILHGN 720
  721 NDGFRKQGLQ VVAGLSRDLV NVKKSAGMDF DVLSSYVTKL EMGLDKLRSF LKTETTQGRF 780
  781 FDSMKTFLKE AEEEIRKIKG GERKALSMVK EVTEYFHGNA AREEAHPLRI FMVVRDFLGV 840
  841 LDNVCKEVKT MQEMSTSMGS ASARSFRISA TASLPVLHRY KARQDDTSSD SEHSSNSST

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle