YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MFL1_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.28
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEARLSETLG LPSPNLNHCH FPNEFNSLFT HFSDLTSVQS PIVRNPKLKT KSSQKPPKFS  60
   61 ANFRRSDPPF ASTSISDPTH EKPGPEFLKW IKPASRSSPR IQTLIKQLSV WERAIIGAGA 120
  121 GGLAGAFTYV TLLPLDAIKT KLQTKGASQV YSNTFDAIVK TFQAKGILGF YSGVSAVIVG 180
  181 STFSSAVYFG TCEFGKSLLS KFPDFPTVLI PPTAGAMGNI ISSAIMVPKE LITQRMQAGA 240
  241 SGRSYQVLLK ILEKDGILGL YAGYSATLLR NLPAGVLSYS SFEYLKAAVL EKTKQSHLEP 300
  301 LQSVCCGALA GAISASITTP LDVVKTRLMT QIHVEAVDKL GGAMYTGVAG TVKQILTEEG 360
  361 WVGFTRGMGP RVVHSACFSA IGYFAFETAR LTILNEYLKR KEESEANVAA DS

Type	Start	End	Confidence
Cytoplasmic	1	166	0.53
Transmembrane Helix	167	190	0.85
Non-Cytoplasmic	191	207	0.53
Transmembrane Helix	208	227	0.76
Cytoplasmic	228	303	0.60
Transmembrane Helix	304	319	0.28
Non-Cytoplasmic	320	412	0.49