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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149045779, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASVRASARG ALLLLLSAAG VAKVTGGLAP GSAGAVCCNH SKDNQMCRDV CEQIFSSKSE  60
   61 SRLKHLLQRA PDYCPETMVE IWSCMNSSLP GVFKKSDGWV GLGCCELAIG LECRQACKQA 120
  121 SSKNDISKVC RKEYENALFS CISRNEMGSV CCSYAGHHTN CREFCQAIFR TDSSPGPSQI 180
  181 KAVENYCASI SPQLIHCVNN YTQSYPMRNP TDSLYCCDRA EEHACQSACR RILTSKKTEM 240
  241 EIVDGLIEGC KTQPLPQDPL WQCFLESSQS VHPGVTVHPP PSTGLDGAKL HCCSKANTSV 300
  301 CRELCTKLYS MSWGNTQSWQ EFDRICEYNP GEVSMLACLA DVREPCQLGC TNLTYCTNFN 360
  361 NRPTELFRSC TAQSDQGAMS DMRLWEKGSI KMPFISIPVL DIRTCQPDLW KAVACSLQIK 420
  421 PCHRKSRGSI ICKSDCVEIL KKCGDQNKFP EAHTAESICE FLSPADDVEN CIPLDTYLRP 480
  481 SALGNIIEEV THPCNPNPCP ANELCEVNRK GCPSGDPCLP YSCVQGCKLG EASDFIVRQG 540
  541 ALIQVPSSAG EVGCYKICSC GQSGLLENCM EMHCIDLQKS CIVGGKRKSH GTSFTIDCNV 600
  601 CSCFAGNLVC STRLCLSEHS SDDDRRAFTG LPCNCADQFV PVCAQNGRTY PSACIARCVG 660
  661 LQDHQFEFGP CISKDPCNPN LCPKSQRCVP KPQVCLTTFD KFGCSQYECV PRQLTCDQAR 720
  721 DPVCDTDHVE HSNLCTLYQR GKSLSYRGPC QPFCRTTEPV CGHNGETYSS VCAAYSDRVA 780
  781 VDYYGRCQAV GVLSEHSAVT ECAAVKCPSL SAIGCKPIIP PGACCPLCAG MLRVLFDKEK 840
  841 LDTIAKIEAC NKEAEKIESL INSDSPTLAS HVPLSALIIS QVQVSSSLPS SAVVGRLPPV 900
  901 HSLPLFLSLG LTVHLLQTCP 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle