YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25372996, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.35
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARSRRKYRN SRAKVRVALP KKNPNIFKPA FNFPPKLRAL MGDDVPEWDD QASVIQNYKS  60
   61 FGVISNPNLL GIRARTDHMI QDDSLNVPPP VEPPTDDPIA KEFEPIDSGS ELEEDGHVPR 120
  121 QEAKLDAAFG CNTSKAMYEI SDLQRQEPDF SFMMMMMISV SFVQFCYKLA TTLQWL

Type	Start	End	Confidence
Non-Cytoplasmic	1	149	0.54
Transmembrane Helix	150	171	0.75
Cytoplasmic	172	176	0.35