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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: UGGG1_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCSRGDANAA GAAAARRVTG LCYNMGLLIA LALLCLFSLA EANSKAITTS LTTKWFSAPL  60
   61 LLEASEFLAE DSQEKFWSFV EASQNIGSSD QHDTDRSYYD AILEAAFRFL SPLQQNLLKF 120
  121 CLSLRSYSAS IQAFQQIAVD EPPPEGCKSF LSVHGKQTCD LGTLESLLLT APDRPKPLLF 180
  181 KGDHRYPSSN PESPVVIFYS EIGHEEFSNI HHQLISKSNE GKINYVFRHY ISNPRKEPVH 240
  241 LSGYGVELAI KSTEYKAKDD TQVKGTEVNT TVIGENDPID EVQGFLFGKL RELYPSLEGQ 300
  301 LKEFRKHLVE STNEMAPLKV WQLQDLSFQT AARILAAPVE LALVVMKDIS QNFPTKARAI 360
  361 TKTAVSAQLR AEVEENQKYF KGTIGLQPGD SALFINGLHI DLDTQDIFSL FDTLRNEARV 420
  421 MEGLHRLGIE GLSLHNILKL NIQPSETDYA VDIRSPAISW VNNLEVDSRY NSWPSSLQEL 480
  481 LRPTFPGVIR QIRKNLHNMV FIVDPVHETT AELVSIAEMF LSNHIPLRIG FIFVVNDSED 540
  541 VDGMQDAGVA VLRAYNYVGQ EVDGYHAFQT LTQIYNKVRT GEKVKVEHVV SVLEKKYPYV 600
  601 EVNSILGIDS AYDQNRKEAR GYYEQTGVGP LPVVLFNGMP FEKEQLDPDE LETITMHKIL 660
  661 ETTTFFQRAV YLGELSHDQD VVEYIMNQPN VVPRINSRIL TAKREYLDLT ASNNFYVDDF 720
  721 ARFSALDSRG KTAAIANSMN YLTKKGMSSK EIYDDSFIRP VTFWIVGDFD SPSGRQLLYD 780
  781 AIKHQKTSNN VRISMINNPS REISDSSTPV SRAIWAALQT QTSNSAKNFI TKMVKEETAE 840
  841 ALAAGVDIGE FSVGGMDVSL FKEVFESSRM DFILSHALYC RDVLKLKKGQ RVVISNGRII 900
  901 GPLEDSELFN QDDFHLLENI ILKTSGQKIK SHIQQLRVEE DVASDLVMKV DALLSAQPKG 960
  961 EARIEYQFFE DKHSAIKLKP KEGETYYDVV AVVDPVTREA QRLAPLLLVL AQLINMSLRV1020
 1021 FMNCQSKLSD MPLKSFYRYV LEPEISFTAD NSFAKGPIAK FLDMPQSPLF TLNLNTPESW1080
 1081 MVESVRTPYD LDNIYLEEVD SIVAAEYELE YLLLEGHCYD ITTGQPPRGL QFTLGTSANP1140
 1141 TTVDTIVMAN LGYFQLKANP GAWILRLRKG RSDDIYRIYS HDGTDSPPDA NDVVVILNNF1200
 1201 KSKIIKVKVQ KKADMANEDL LSDGTNENES GFWDSFKWGF SGQKTEEVKQ DKDDIINIFS1260
 1261 VASGHLYERF LRIMMLSVLK NTKTPVKFWF LKNYLSPTFK EFIPYMAKKY NFQYELVQYK1320
 1321 WPRWLHQQTE KQRIIWGYKI LFLDVLFPLV VDKFLFVDAD QIVRTDLKEL RDFNLDGAPY1380
 1381 GYTPFCDSRR EMDGYRFWKS GYWASHLAGR KYHISALYVV DLKKFRKIAA GDRLRGQYQG1440
 1441 LSQDPNSLSN LDQDLPNNMI HQVPIKSLPQ EWLWCETWCD DASKKRAKTI DLCNNPMTKE1500
 1501 PKLEAAVRIV PEWQDYDQEI KQLQTLFQEE KELGTLHEEE TQEGSQKHEE L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle