YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149040072, gi...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVAGLIRVV AFIFTVVTMW IFLRSYTNFN RKTIRLPRWL DTPKFKCGLS KSCLNNFFAF  60
   61 KISSGAANVV GPSMCFEDEI IMSPVRNNVG RGLNIALVNG TTGRVIRKAS FDMYSGEPQP 120
  121 LLDFLTEIPD STLVLVASYD DPGTKMNDKI KTLFTNLGSS YAKQLGFRDS WVFVGAKDLR 180
  181 SKSPYEQFLK NNPETNKYEG WPELLELEGC VPKKVM

Type	Start	End	Confidence
Cytoplasmic	1	5	0.56
Transmembrane Helix	6	26	0.86
Non-Cytoplasmic	27	216	0.67