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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149041099, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGALGSLWVF FALIAPGVLE LSCDPPPEVN NTRRLYYSLP VLPGTVVRYT CLPGYRLIGE  60
   61 KAIFCISKDQ VTATWDKATP ICEPWNKMSA CSKPIVPGGI INPGSRPPFK HGDSVTVTCK 120
  121 ANFTMKGSKT VWCRANKMWG PTPLPVCESD FPLECPSLPT IHNGHHTGQH VEKFVAGLSV 180
  181 TYSCEPGYLL VGKKTIKCLS SGAWDDVIPT CKEAKCERPE KLPNGQVKEP PSLRVGTTVY 240
  241 FSCNEGYELQ GQPSSKCVIV EQKAVWTKKP VCKEILCPPP PPVLNGRHSG RFSGNVPYGN 300
  301 NVTYMCDPSP EKGVNFTLIG EKTIYCTNSS EKTGIWSGPA PYCKLSISEA QCLRPQINRG 360
  361 QILSILKESY SYNDTVAFSC EPGFTLKGSG RIRCSAQGTW KPPVPVCEKG CQAPPKIING 420
  421 QKEDRYFLNF DPGTSIRYSC DPGYFLVGED TIHCTSEGKW TPIPPQCKVA ECKPVGPHVF 480
  481 ERPQNHFIRP AINSSCDEGF QISESAYQLC QGTIPWFIEI RLCKEITCPP PPIILNGTHT 540
  541 WRSSEDVPYG TVITYMCYPG SEEGVKFKLI GEQTIHCTSD SRGRGSWSSP APLCKLSLPA 600
  601 VQCTEVHVEN GVKLTDNKAP YFYNNSVTFK CRDGYILIGS SQIRCKANNT WDPEAPHCKK 660
  661 EGCEPMRKLP GISDHSLIKL VNRTCQNGYQ LTGYTYEKCQ NAENGTWFQK IAVCTVILCP 720
  721 PPPTIANGSH TGMMAEHFLY GNEVSYECDK GFYLLGEKSL QCKGHGSWSG PPPQCLQSSP 780
  781 LTHCPDPEVK YGYKLNKTHS AYSHNDIIHV VCNQGFIMNG SHLIRCHTNN TWLPGVPTCI 840
  841 RTASLGCQSP PTIPNGNHTG GTIARFSPGM SVMYSCYQGY LMAGEARLIC THEGTWSHPA 900
  901 PYCKEVNCSF PEDTNGIQKG FQPGKTYRFG TTVTLECEDG YSLEGSPQSQ CQDENQWNPP 960
  961 LAICKNRSTV PLVSGISAGS AFIIESTCVC GYSYRNYYTK TRPKDGALHL ETREVYAVDP1020
 1021 YNPAS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle