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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LAC4_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSHMVWFLF LVSFFSVFPA PSESMVRHYK FNVVMKNVTR LCSSKPTVTV NGRYPGPTIY  60
   61 AREDDTLLIK VVNHVKYNVS IHWHGVRQVR TGWADGPAYI TQCPIQPGQV YTYNYTLTGQ 120
  121 RGTLWWHAHI LWLRATVYGA LVILPKRGVP YPFPKPDNEK VIVLGEWWKS DTENIINEAL 180
  181 KSGLAPNVSD SHMINGHPGP VRNCPSQGYK LSVENGKTYL LRLVNAALNE ELFFKVAGHI 240
  241 FTVVEVDAVY VKPFKTDTVL IAPGQTTNVL LTASKSAGKY LVTASPFMDA PIAVDNVTAT 300
  301 ATVHYSGTLS SSPTILTLPP PQNATSIANN FTNSLRSLNS KKYPALVPTT IDHHLFFTVG 360
  361 LGLNACPTCK AGNGSRVVAS INNVTFIMPK TALLPAHYFN TSGVFTTDFP KNPPHVFNYS 420
  421 GGSVTNMATE TGTRLYKLPY NATVQLVLQD TGVIAPENHP VHLHGFNFFE VGRGLGNFNS 480
  481 TKDPKNFNLV DPVERNTIGV PSGGWVVIRF RADNPGVWFM HCHLEVHTTW GLKMAFLVEN 540
  541 GKGPNQSILP PPKDLPKC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle