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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157823549, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.39
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIMENSKEQ ELQTLGSRVW DNPAYSSPPS PNGTPRICTV SSVALPETQP KKPEVRRQEK  60
   61 TPRVPVSGCC LLICRGIRGL WGTTLTENTA ENRELYVKTT LRELVVYIVF LVDVCLLTYG 120
  121 MTSSSAYYYT KVMSELFLHT PSESAVSFQT ISSMSDFWDG PLLDSLYWTK WYNNQSLGSS 180
  181 SHSFIYYENL LLGVPRLRQL RVRNDSCVVH EDFREDILNC YDVYSPDKED QLPFGPLNGT 240
  241 AWTYHSQNEL GGSSHWGRLT SYSGGGYYLD LPGSRQASAE ALQGLQEGLW LDRGTRVVFI 300
  301 DFSVYNANIN LFCILRLVVE FPATGGAIPS WQIRTVKLIR YVNNWDFFIV GCEVIFCIFI 360
  361 FYYVVEEILE IRVHRFRYLS SVWNILDLVV ILLSIVAVGF HVFRTLEVNR LMGELLQQPD 420
  421 TYPDFEFLAF WQTQYNNMNA VNLFFAWIKI FKYISFNKTM TQLSSTLARC AKDILGFAIM 480
  481 FFIVFFAYAQ LGYLLFGTQV ESFSTFVKCI FTQFRIILGD FDYNAIDNAN RILGPVYFIT 540
  541 YVFFVFFVLL NMFLAIINDT YSEVKEELAG QRDQLQLSDL LKQSYSKTLQ RLRLRKERVS 600
  601 DVQKVLKGGE PEIQFEDFTN TLRELTRRVL QLQRVLEGVV SQVDALSSKL KMLERKGELA 660
  661 PSPGMARGAS CLGEPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle