YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CRK36_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.85
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERSNLFHIP CFLLLFLLFN INGVHTTFVC GDEDFSPNTS YVENLESLLP SLASNVIRER  60
   61 GFYNVSLDGV YALALCRKHY EVQACRRCVD RASRTLLTQC RGKTEAYHWD SENDANVSCL 120
  121 VRYSNIHRFG KLKLEPIGNV PHSSLDPSSN LTRISQEFAA RANRTVEVAS TADESSVLKY 180
  181 YGVSSAEFTD TPEVNMLMQC TPDLSSSDCN HCLRENVRYN QEHNWDRVGG TVARPSCYFR 240
  241 WDDYRFAGAF DNLERVPAPP RSPQTRQDYR VKKGRMFQPW SVVVVVFPTG INLAVFVAFV 300
  301 LAYRRMRRRI YTEINKNSDS DGQATLRFDL GMILIATNEF SLENKLGQGG FGSVYKGILP 360
  361 SGQEIAVKRL AGGSGQGELE FKNEVLLLTR LQHRNLVKLL GFCNEGNEEI LVYEHVPNSS 420
  421 LDHFIFDEDK RWLLTWDVRY RIIEGVARGL LYLHEDSQLR IIHRDLKASN ILLDAEMNPK 480
  481 VADFGMARLF NMDETRGETS RVVGTYGYMA PEYVRHGQFS AKSDVYSFGV MLLEMISGEK 540
  541 NKNFETEGLP AFAWKRWIEG ELESIIDPYL NENPRNEIIK LIQIGLLCVQ ENAAKRPTMN 600
  601 SVITWLARDG TFTIPKPTEA AFVTLPLSVK PENRSMSERK DKDPFSVDEV SITVLYPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle