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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149037882, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.89
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWLRVARLK PLELLLPLLP LLLGTRPHGS PGPLQCYSVG PLGILNCSWE PLGDLETPPV  60
   61 LYHQSQKYHP NRTKEVKVPS RQSWVTIPRK QFTTADELLI WGTQEGQLLW PPVSVNLETQ 120
  121 MKPDTPQIFS DVDFFKEETL EAIVQWEPPK WPLHKVLICQ FRYKKCQTKE WTQLEPQLKT 180
  181 DLMTPIEMQN LEPGTGYQVS GRCQVENGYP WGEWSPDLSF PTPFLAPEDV WVSGTICETS 240
  241 GKPAALLFWK DPGPCVQVTY TVWLGVGDVT TTQEEVPCCK SPIPAQIEWA VVSTGNQTSW 300
  301 MPLTNLSLVC LAPESAPCDV RVSSTDGSPG IKVTWKQETG KPWAYVVDWA QDGDSLDKLN 360
  361 WTRLPPENLS TLLSVSSQTK TVTLPNLYSG PFKLWVMVST AAGQGPPGPS LSLHIPDNRI 420
  421 RWKFLPWVLS LWGLLLVGCG LSLAPPRSLL ARCLYQRHKL LPQWIWERVP DPANSNSGQP 480
  481 YIKEVSLPQP PKDGPILEVE EMELQPVTES PKASVPLYSG YEKHFLPTPE ELGLLRPPAP 540
  541 RVLDCSASG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle