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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149042666, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSPHQQLL HHHSTEVSCD SSGDSNSVRV KINPKQLSSN THPKHCKYSI SSSCSSSGDS  60
   61 GGLPRRVGGG GRLRRQKKLP QLFERASSRW WDPKFDSVNL EEACLERCFP QTQRRFRYAL 120
  121 FYVGFACLLW SIYFAVHMRS KVIVMVVPAL CFLVVCVGFF LFTFTKLYAR HYAWTSLALT 180
  181 LLVFALTLAA QFQVWTPLSG RVDSPNHTLT AKAADTCLSQ VGSFSMCIEV LFLLYTVMHL 240
  241 PLYLSLFLGV VYSVLFETFG YHFRNEDCFP SPDPGALHWE LLSRALLHVC IHAIGIHLFV 300
  301 MSQVRSRSTF LKVGQSIMHG KDLEVEKALK ERMIHSVMPR IIADDLMKQG DEESENSVKR 360
  361 HATSSPKNRK KKASIQKAPI AFRPFKMQQI EEVSILFADI VGFTKMSANK SAHALVGLLN 420
  421 DLFGRFDRLC EETKCEKIST LGDCYYCVAG CPEPRADHAY CCIEMGLGMI KAIEQFCQEK 480
  481 KEMVNMRVGV HTGTVLCGIL GMRRFKFDVW SNDVNLANLM EQLGVAGKVH ISEATAKYLD 540
  541 DRYEMEDGRV MERLGQSVVA DQLKERQLKF TLSCFEKKIN SICMFT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle