YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25402611, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIMRRSLSLR SITMMILMAV LVWSVTLETC IARRGRHWRH SHRSSSDLSD SLSNKKPKSH  60
   61 GNSHHHSSHN NNHHHKSKPK PKPKLKTPPK AHDNNSPVVS GPPKVQPPPL PPQKGSQVFN 120
  121 VMDFGAKGDG KCDDTKAFEA AWVAACKIEA SVMLVPPEYT YLVGPISFSG PYCQANIVFQ 180
  181 LDGTIIAPTD SKTWGKGLMW WIDFTKLKGI KVQGKGVIDG RGSGWWQQDS PFIDSDTKLI 240
  241 VPLNNSANQN PPMPIRSELD ERMPSIKPTV RNRYWHCEIA LRFSGSFGVE VTGITIQNSP 300
  301 QCHLKFDDCV GVVVHDIAVS SPGDSPNTDG IHLQNTKDVL IHSTTLACGD DCISIQTGCS 360
  361 NVFVHNVNCG PGHGISIGSL GKEGTKACVS NITVRDVAMH NTMTGVRIKT WQGGVGSVKG 420
  421 IIFSNIQLNQ VQIPITINQF YCDHSKCKNQ TSAVAVEGVT YERIKGTYTV KPVHFACSDN 480
  481 FPCVDVQLSS IELKPVQEKY RMYDAYCWQT FGELNTPTLP PIDCLKIGKP PRNKVQSDHD 540
  541 VC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle