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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PME47_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTHSSSLVF LALLCLSWAL LVSPTRPPSQ PPSHPPIQPS SQPPTQPPSQ PPTQPPTQPP  60
   61 SHPPTQPPTP PPSQSPSQPS PLPPNIACKS TPYPKLCRTI LSAVKSSPSD PYHYGKFTMK 120
  121 QCLKQARRLS KVINRFAQRV EADPGTSTVE EVSAVADCGE LAELSVEYLE TVTEELKAAE 180
  181 LMTAALVDRV TSLLGGVVTN QQTCLDGLVD AKSGFATAIG TPLGNLTRLY SVSLGLVSHA 240
  241 LNRNLKRYKG SKGKIFGGGN KPVREPLETL IKVLRKTCDK GKDCRKANRN LGELGETSGG 300
  301 SILVREAVTV GPYETDNFPT ITEAVAAAPN HTFPEQGYFV IYARAGLYEE YVVISNKKRN 360
  361 IMLIGDGINK TIISGNHSFI DGWTTYNSST FAVVGDRFVA VDVTFRNTAG PEKHQAVAVR 420
  421 NNADGSTFYR CSFEGYQDTL YVHSLRQFYR ECDIYGTIDF IFGNAAAIFQ NCNIYARKPM 480
  481 ANQKNAVTAH GRTDPNQKTG ISIINCTIGA APDLAADPKS TMTFLGRPWK PYSRTVYIQS 540
  541 YISDVVQPVG WLEWNGTTGL DTISYGEYDN FGPGADTSKR VQWSGYSLLN LVQAMNFTVY 600
  601 NFTLGDTWLP QTDIPFYGGL LHTE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle