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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149043683
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTRRPAGNM RLAHTLLPLL LQACWVAAQD IQGSRAIAFQ DCPVDLFFVL DTSESVALRL  60
   61 KPYGALVDKV KSFTKRFIDN LRDRYYRCDR NLVWNAGALH YSDEVEIIRG LMRMPSGRDE 120
  121 LKASIDAVKY FGKGTYTDCA IKKGLEELLI GGSHLKENKY LIVVTDGHPL EGYKEPCGGL 180
  181 EDAVNEAKHL GIKVFSVAIT PDHLEPRLSI IATDHTYRRN FTAADWGHSR DAEETISQTI 240
  241 DTIVDMIKNN VEQVCCTFEC QAARGPPGPR GDPGYEGERG KPGLPGEKGE AGDPGRPGDL 300
  301 GPVGYQGMKG EKGSRGEKGS RGPKGYKGEK GKRGIDGVDG MKGETGYPGL PGCKGSPGFD 360
  361 GIQGPPGPKG DAGAFGLKGE KGEAGAEGEA GRPGNSGPPG DEGEPGEPGP PGEKGEAGDE 420
  421 GNAGPDGAPG ERGGPGERGP RGTPGVRGPR GDPGEAGPQG DQGREGPVGI PGDPGESGPI 480
  481 GPKGYRGDEG PPGPEGLRGA PGPVGPPGDP GLMGERGEDG PPGNGTEGFP GFPGYPGNRG 540
  541 PPGINGTKGY PGLKGDEGEA GDPGEDNNDV SPRGVKGAKG YRGPEGPQGP PGHVGPPGPD 600
  601 ECEILDIIMK MCSCCECTCG PIDILFVLDS SESIGLQNFE IAKDFIIKVI DRLSKDELVK 660
  661 FEPGQSHAGV VQYSHNQMQE HVDMRSPNVR NAQDFKEAVK KLQWMAGGTF TGEALQYTRD 720
  721 RLLPPTQNNR IALVITDGRS DTQRDTTPLS VLCGSDIQVV SVGIKDVFGF VAGSDQLNVI 780
  781 SCQGLSQSRP GISLVKENYA ELLDDGFLKN ITAQICIDKK CPDYTCPITF SSPTDITILL 840
  841 DSSASVGSHN FETTKVFAKR LAERFLSAGR EDPTQVVRVA VVQYSGQGQQ QPGRASLQFQ 900
  901 QNYTVLASSV DSMDFINDAT DVNDALSYVT RFYRENSSGA TKKRVLLFSD GNSQGATAEA 960
  961 IEKAVQEAQR GGIEIFVMVV GPQVNEPHIR VLVTGKTAEY DVAFGERHLF RVPNYQALLR1020
 1021 GVLYQTVSRK VALG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle