YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DIR5_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGQMKSFLF LFVFLVLTKT VISARKPSKS QPKPCKNFVL YYHDIMFGVD DVQNATSAAV  60
   61 TNPPGLGNFK FGKLVIFDDP MTIDKNFQSE PVARAQGFYF YDMKNDYNAW FAYTLVFNST 120
  121 QHKGTLNIMG ADLMMVQSRD LSVVGGTGDF FMSRGIVTFE TDTFEGAKYF RVKMDIKLYE 180
  181 CY

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	182	0.99