YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	APX3_ARATH
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPIVDAEY LKEITKARRE LRSLIANKNC APIMLRLAWH DAGTYDAQSK TGGPNGSIRN  60
   61 EEEHTHGANS GLKIALDLCE GVKAKHPKIT YADLYQLAGV VAVEVTGGPD IVFVPGRKDS 120
  121 NVCPKEGRLP DAKQGFQHLR DVFYRMGLSD KDIVALSGGH TLGRAHPERS GFDGPWTQEP 180
  181 LKFDNSYFVE LLKGESEGLL KLPTDKTLLE DPEFRRLVEL YAKDEDAFFR DYAESHKKLS 240
  241 ELGFNPNSSA GKAVADSTIL AQSAFGVAVA AAVVAFGYFY EIRKRMK

Type	Start	End	Confidence
Non-Cytoplasmic	1	258	0.95
Transmembrane Helix	259	280	0.90
Cytoplasmic	281	287	0.84