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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CRK37_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.86
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKSCVVTSS FSLLLLFLQT LKYVHAGFIC YGDFFNVNYG VSRTYLFSSL PSNVVSNGGF  60
   61 YNASFGRDSK NNRVHVVALC RRGYEKQACK TCLEHVIEDT KSKCPRQKES FSWVTDEFDD 120
  121 VSCSLRYTNH STLGKLELLP NTINPNPNSI DSKFNNMAMF SQEWIAMVNR TLEAASTAEN 180
  181 SSVLKYYSAT RTEFTQISDV YALMQCVPDL SPGNCKRCLR ECVNDFQKQF WGRQGGGVSR 240
  241 PSCYFRWDLY PYYRAFDNVV RVPAPPPQAS STIIDYGRDE KSFQGSNIAI IVVPSVINLI 300
  301 IFVVLIFSWK RKQSHTIIND VFDSNNGQSM LRFDLRMIVT ATNNFSLENK LGQGGFGSVY 360
  361 KGILPSGQEI AVKRLRKGSG QGGMEFKNEV LLLTRLQHRN LVKLLGFCNE KDEEILVYEF 420
  421 VPNSSLDHFI FDEEKRRVLT WDVRYTIIEG VARGLLYLHE DSQLRIIHRD LKASNILLDA 480
  481 EMNPKVADFG MARLFDMDET RGQTSRVVGT YGYMAPEYAT YGQFSTKSDV YSFGVMLLEM 540
  541 ISGKSNKKLE KEEEEEEEEL PAFVWKRWIE GRFAEIIDPL AAPSNNISIN EVMKLIHIGL 600
  601 LCVQEDISKR PSINSILFWL ERHATITMPV PTPVAYLTRP SLSLGH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle