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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CSLB4_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAESSSPLPP LCERISHKSY FLRAVDLTIL GLLLSLLLYR ILHVNQKDTV WIVAFLCETC  60
   61 FTFVWLLITN IKWSPADYKT YPERLDERVH ELPPVDMFVT TADPVREPPL IVVNTVLSLL 120
  121 AVNYPANKLA CYVSDDGCSP LTYFSLKEAS KFAKIWVPFC KKYNVRVRAP FMYFRNSPEA 180
  181 AEGSEFSKDW EMTKREYEKL SQKVEDATGS SHWLDAEDDF EAFLNTKSND HSTIVKVVWE 240
  241 NKGGVGDEKE VPHVVYISRE KRPNHFHHYK AGAMNFLVRV SGLMTNAPYM LNVDCDMYVN 300
  301 EADVVRQAMC IFLQKSMDSN HCAFVQYPQD FYDSNVGELT VLQLYLGRGI AGIQGPQYAG 360
  361 SGCFHTRRVM YGLSLDDLGD DGSLSSIATR KYLAEESLTR EFGNSKEMVK SVVDALQRKP 420
  421 FPQKNLKDSL ETAQEMGHCH YEYQTSWGKN IGWLYDSTTE DVNTSIGIHS RGWTSSYIFP 480
  481 DPPAFLGCMP QGGPEVMVQQ RRWATGLLEI LFNKQSPLIG MFCRKIRFRQ SLAYLYVFSW 540
  541 GLRSIPELFY CLLPAYCLLH NSALFPKGVY LGIIITLVGI HCLYTLWEFM NLGFSIQSWY 600
  601 VTQSFGRIKT TCSWLFSVLD VILKLLGISK TVFIVTKKTM PETKSGSGSK KSQREVDCPN 660
  661 QDSGKFEFDG SLYFLPGTFI VLVNLAALAG CLVGLQSRGG GGSGLAEACG CILVVILFLP 720
  721 FLKGMFEKGK YGIPFSTLSK AAFLAALFVV LSVGN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle