YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18253005, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLRRAKTLP KTLQNLRLFS PAANAALSLD HIQETQLTYL PGFPRPDPKH AETILAVPRS  60
   61 VSGKSISAKE RKAGRVPSII FEQEDGQHGG NKRLISVQTN QIRKLVNHLG YSFFLSRLFD 120
  121 VEVRAEIGSD EVIEKVRALP RAIHLHSGTD APLNVTFIRA PPGALLKVDI PLVFIGDDVS 180
  181 PGLKKGASLN TIKRTVKFLC PAEIIPPYIE VDLSQLDIGQ KLVMGDLKVH PALKLIKSKD 240
  241 EPIVKVAGGR VTDTQKKSSD TQKK

Type	Start	End	Confidence
Signal Peptide	1	25	0.84
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	264	0.99