YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25296199, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNEKCEVAL PLKLKSEKPS MASSSSLFLL PLLLLVSQAS ASTVIFYNKC TYTVWPGIQP  60
   61 SSGQSLLAGG GFKLSPNRAY TLQLPPLWSG RFWGRHGCSF DRSGRGRCAT GDCGGSFLCN 120
  121 GAGGVPPATL AEITLGHDMD FYDVSLVDGY NLAMSIMPVK GTGKCTYAGC VSDLNRMCPV 180
  181 GLQVRSRDGT QVVACKSACS AFNSPRYCCT GLFGNPQSCK PTAYSKIFKV ACPKAYSYAY 240
  241 DDPTSIATCS KANYVVTFCP HRGR

Type	Start	End	Confidence
Signal Peptide	1	41	0.99
N-region	1	32
H-region	33	38
C-region	39	41
Cleavage Site	41	42
Non-Cytoplasmic	42	264	0.99