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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149037054
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGQKFLVLL SILWGMVFGL TNTQHSWAVP EDEDSSPTRN STSAPVSEVL SLQVLSATQN  60
   61 PPPEVPLAPE RPSEDTLLQS ILQPSESSTP PEGRSQTPTP TEKTGTALAS LPLSLQGKPS 120
  121 IKPSSGAETV MLANATLKFL QSFSRKSNQQ AVSPKSSGDI GNRSARETHL RRSGNSGNQR 180
  181 PSYQKSSFET TRGKNWCAHV HTKLSPTVIL DTHGSNVNSG RGSCGWPSGL CSRRSQKSSN 240
  241 AVYRMQHKIV TSLEWRCCPG YIGPNCQLKA EERQQLVHSN QAESHTAVDQ GTAQQQKQDS 300
  301 GDPAMIHKMA EQLSQQERKL MLLQKKVDNV SLAAGDLRNA YLSLEEKVSK DNSKEFQSFL 360
  361 KALKSKSIDD LLKNIVKDQF KVFQDDMQET IAQLFKTVSS LSKDLESTRQ AVLQVNQSFV 420
  421 SVTAQKDSAL IRENQPTWKD ITELKNSITD IRQEMALTCE KPLKELVAKQ SHLEGALEQE 480
  481 HSQIVLYHQS LNETLSNMQE AHTQLLSILQ VSGTENVATE ESVNSNVTKY VSVLQETASK 540
  541 QGLMLLQMLS DLHVQESKIS NLTILLEMEK ESARGECEEM LSKCRHDFKF QLKDTEENLH 600
  601 VLNQTLTEVI FPMDIKVDKM SEQLNDLTYD MEILQPLLEQ RSLLQQQIIH EPKEDTVTRR 660
  661 ELQNLIGAVN QLNVLTKELT KRHNLLRNEV QSRSEAFERR ISDHALETED GLNKTMIVIN 720
  721 NAIDFVQDNY VLKETLSAKP YNPKVCECNQ NMDAILSFIS EFQHLNDSIQ TLVNDNQKYN 780
  781 FILQIAKALT AIPKDEKLSQ LNFQKVYQMY NETTSQVSKC QQNVSYLKEH MLAVKKNTKE 840
  841 FETRLQGIES KVTKALIPYY ISFKKGGSLS NGDPDLQLKV LNTRFKALEA KSIHLSVSFS 900
  901 SLNKTVHELS MACCNASTST YGQNASIPMW TKGSLTDSQR SLKSLTELVE SIVEMKTQAV 960
  961 LSNLTWNVDR LVSDSLANIV KPQKQIKLQK KPNTLKKTVN MTTILIGRTQ RNTDSITHPA1020
 1021 AQEYSSCSSF PCQNGGTCIS GRSSFICACR HPFMGDTCTV KIVEENALAP DFSKGSYRYA1080
 1081 PMVAFFVSHT HGMTAPGPIL FNDLSVNYGA SYNPRTGKFR IPYLGVYIFK YTIESFSAHI1140
 1141 SGFFVVDGVD KLRFESENTD SEIHCDRVLT GDALFELNYG QEVWLRLVKG TIPIKYPPVT1200
 1201 TFSGYLLYRT 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle