YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6648194, gi\|2...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGYFGVSTI FIICLLGISA NAEVFTIGSS SGSDITQALL KAFTSACQSS SPSKVVIPKG  60
   61 EFKLGEIEMR GPCKAPIEVT LQGTVKADGN AIQGKEKWVV FGNIDGFKLN GGGAFDGEGN 120
  121 AAWRVNNCHK TFECKKLPIS IRFDFILNSE IRDISSIDAK NFHINVLGAK NMTMNNIKIV 180
  181 APEDSPNTDG IHLGRSDGVK ILNSFISTGD DCISVGDGMK NLHVEKVTCG PGHGISVGSL 240
  241 GRYGHEQDVS GIKVINCTLQ ETDNGLRIKT WPSAACSTTA SDIHFEDIIL KDVSNPILID 300
  301 QEYCPWNQCN KQKASTIKLV NISFKNIRGT SGNKDAVKLL CSKGYPCQNV EIGDIDIKYN 360
  361 GADGPATFHC SNVSPKILGS QSPKACSAPA A

Type	Start	End	Confidence
Signal Peptide	1	22	0.96
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	391	0.99