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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157823277, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLCCLLARAS NLPNVKKDRR SDPVASLIFR EAKIPLQEVL ATPSLSASFN APLLDSKQQP  60
   61 TGASLVLQVS YTPPPGAAPL FPPPASLAPS PTLPDMDLVA DTGGEEDTED QGLTGDEAEL 120
  121 FPDPSVAVGP GGPTTPKKPP SHPPPHYPGG KRKRSSAPPR KLLSDKPQDF QIRVQVIEGR 180
  181 QLPGVNIKPV VKVTAAGQTK RTRIQKGNSP LFNETLFFNV FDSPLELFDE PIFITVVDSR 240
  241 SLRTDALLGE FRMDVGTVYR EPRHAYLRKW LLLSDPDDFS AGARGYLKAS LCVLGPGDEA 300
  301 PLDKKDPSED KEDIEGNLLR PTGVALRGAH FCLKLFRAED LPQMDDAVMD NVKQIFGFDS 360
  361 NKKNLVDPFV EVSFAGKMLC SKILEKTANP QWNQNITLPA MFPSMCEKMR IRVMDWDRLT 420
  421 HNDTVATTYL GMSKISATGG EIEEEPAGVL KSPATDLDDN LGFLPTFGPC YVNLYGSPRE 480
  481 FTGFPDPYAE LNTGKGEGVA YRGRLLLSLE TKLVEHSEQK VEDLPADDIL RVEKYLRRRK 540
  541 YSLFAAFYSA TMLQDVDDAI QFEVSIGNYG NKFDTTCLPL ASTTQYSRAV FDGCHYYYLP 600
  601 WGNVKPVVVL SSYWEDISHR VETQNQLLRI ADRLEANLEQ VHLALKAQCS SEDVDALVAQ 660
  661 LTDELLADCS QPLCDIHEIP SATHLDQYLF RLRSRHLSQI KEAALALKLG HSELSTALEQ 720
  721 AEDWLLHLRA LAEEPQNSLP DIIIWMLQGD KRVAYQRVPA HEVLFSRRGP SYCGRNCGNL 780
  781 QTIFLKYPME GMPGPRMPVQ IRIKLWFGLS VDEKEFNQFA EGKLSVFAET YENQTKLALV 840
  841 GNWGTTGLTY PKFSDVTGKI KLPKDSFRPS AGWAWAGDWF VCPEKTLLHD ADAGHLSFVE 900
  901 EVFENQTRLP GGQWIYMSDN YTDVNGEKVL PKDDIECPLG WKWEDEEWST DLNRAVDEQG 960
  961 WEYSITIPPD RKPKHWVPVE KMYYTHRRRR WVRLRRRDLS QMEALKKHRQ AEAEGEGWEY1020
 1021 ASLFGWKFHL EYRKTDAFRR RRWRRRMEPL EKTGPAAVFA LEGALGGMVD DKSEDSMSVS1080
 1081 TLSFGVNRPT ISCIFDYGNR YHLRCYLYQA RDLPAMDKDS FSDPYAIVSF LHQSQKTVVE1140
 1141 KNTLNPTWDQ TLIFYEIEIF GEPASVAERP PSIVVELYDH DTYGADEFMG RCICQPSLER1200
 1201 MPRLAWFPLT RGSQPAGELL AAFELIQREK PAIHHIPGFE MHETSRILDE TEDTDLPYPP1260
 1261 PQREANIYMV PQNIKPALQR TAIEILAWGL RNIKSYQMAS VSSPSLVVEC GGQTVQSCVI1320
 1321 RNLRKNPNFD VCTLFMEVML PREDLYCPPI VVKVIDNRQF GRRPVVGQCT IRSLENFLCD1380
 1381 PYSAESPSPQ GGPDDVSLLS PGEDVLIDID DKEPLIPVQE EEFIDWWSKF FASIGEREKC1440
 1441 GSYLEKDFDT LKVYDTQLEN VEAFGGLSDF CNTFKLYRGK TQEDTEDPSV IGEFKGLFKI1500
 1501 YPLPEDPAIP MPPRQFHQLA AQGPQECLVR IYIIRAFGLQ PKDPNGKCDP YIKISIGKKS1560
 1561 VSDQDNYIPC TLEPVFGKMF ELTCTLPLEK DLKITLYDYD LLSKDEKIGE TVIDLENRLL1620
 1621 SKFGARCGLP QTYCVSGPNQ WRDQLRPSQL LHLFCQQHRV KAPVYRTDRV TFQDKEYTIQ1680
 1681 EIEAGRLPNP HLGPVEERLA LHVLQQQGLV PEHVESRPLY SPLQPDIEQG KLQMWIDIFP1740
 1741 KVLGRPGPPF NITPRKARRF FLRCIIWNTK DVILDDLSLT GEKMSDIYVK GWMVGFEEHK1800
 1801 QKTDVHYRSL GGEGNFNWRF VFPFDYLPAE QVCAVAKKDA FWRLDKTESK IPARVVFQIW1860
 1861 DNDKFSFDDF LGSLQLDLNR MPKPAKTAEK CSLDQLDDTF HPEWFVSLFE QKTVKGWWPC1920
 1921 VTEEGAKKIL AGKLEMTLEI VAESEHEERP AGQGRDEPNM NPKLEDPRRP DTSFLWFTSP1980
 1981 YKTMKFILWR RFRCAIILFI ILFILLLFLG VFVYAFPNYA AMKLVKPFR

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