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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7268653, gi|2...
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTSSPAAFV NGALLRRYIG QKVRAVIQVI RSDVGSVIGK STDDQQIVVK GSPQPPLTTY  60
   61 LEVIGIAETD NTIRAEVWTN FGDSFDVQNY NELCKLANDR RKAMTDLQME VEVDTNSSLQ 120
  121 ESLPKPQVMY RCKKCRRIVA IEENIVPHEP GKGEECFAWK KRSGNSEQVQ CSSIFVEPMK 180
  181 WMQTIHDGMV EEKLLCFGCN GRLGYFNWAG MQCSCGAWLK ITDGFNFMIL YKTELCGSCE 240
  241 LVVLFSNISN KENDYKREEV SKRRPESFNI LKQMASKAIF FFFVSAVCLS SLAGVAIADA 300
  301 DDFDRFQIQG SVYCDTCRVQ FVTRLSKFLE GAKVKLECRS RTNGTVTLTK EAVTDKTGSY 360
  361 RMEVTGDHEE EVCELVLVES PDSGCSDVSK EAYLRNAAKI SLTANDGIVS HETRIVNPLG 420
  421 FMVQTPSAEC PAAFKELGIV PDGLLFGWFG GQARMISETD GRSVTTHGAA TCISGSFKEG 480
  481 YVESGTSAKA RYAAAGSFGR IFSLGTGSSG KHLLCEPVSV VKLGTPEPVI FSSKTASVED 540
  541 RSVVIVSLGK VLLCGLVSVV ELEASEPGIF SSKTASFKER SVAKGFSGKV LLCRPVSVAE 600
  601 PGASEPGIIS PKTASFKEIS VATGSSVKVS LCRPVSVVET GASEPGIFSS KTASFKKFSM 660
  661 AKGSSGKVLL CGPVSVVEVE ASEPGIFSSK TASFKEFSVA KVFSGKVLFC RPVSVVEPGA 720
  721 SEPEIFSSKT ASAEDGYVES SSSREIFSSG TTSAQDGYVG KDSSGKFFSL ETASAEDRYV 780
  781 TPGSSGKPIS LGKADSKNGF VPTSSSCEAS SYGTDSSKDG CVEPGSSSGG IFSSQTASEK 840
  841 YG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle