YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149035855, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANRRGGTDL LSGIIPELCQ KYQELNFLIG GEGPKRIILE EVRERYQLHD RVQLLGALEH  60
   61 KDVRNVLVQG HIFLNTSLTE AFCMAIVEAA SCGLQVVSTK VGGIPEVLPE NLIILCEPSV 120
  121 KSLCEGLEKA IFQVKSGTLP APENIHNVVK TFYTWRNVAE RTEKVYERVS KESVLPMHKR 180
  181 LDRLISHCGP VTGYIFALLA VLSYLFLIFL QWMTPDSVID VAIDATGPRR AWTHQWPRDK 240
  241 KRDENDKVSK SR

Type	Start	End	Confidence
Cytoplasmic	1	186	0.92
Transmembrane Helix	187	208	0.90
Non-Cytoplasmic	209	252	0.88