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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7267752, gi|4...
Protein type: Globular with Signal Peptide
Type Confidence: 0.41
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNYRTSIYV VLSLVIFLNV QRSFVAESSA KRKVHIVYLG EKQHDDPEFV TESHHRMLWS  60
   61 LLGSKEDAND SMVYSYRHGF SGFAAKLTES QAKKIADLPD VVHVIPDSFY KLATTRTWDY 120
  121 LGLSAANPKS LLHETNMGEQ IIIGVIDTDF LSLVLLLIPF LSASMTKMLS VVAGVWPESE 180
  181 VFNDSGFGPV PSHWKGGCET GENFNSSNCN KKLIGAKYFI NGFLAENESF NSTNSLDFIS 240
  241 PRDLDGHGTH VSTIAGGSFV PNISYKGLAG GTVRGGAPRA HIAMYKACWY LDDDDTTTCS 300
  301 SADILKAMDE AMHDGVDVLS ISLGSSVPLY GETDIRDGIT TGAFHAVLKG ITVVCSGGNS 360
  361 GPDSLTVTNT APWIITVAAT TLDRSFATPL TLGNNKVILG QAMYTGPGLG FTSLVYPENP 420
  421 GNSNESFSGT CEELLFNSNR TMEGKVVLCF TTSPYGGAVL SAARYVKRAG GLGVIIARHP 480
  481 GYAIQPCLDD FPCVAVDWEL GTDILLYTRS SGSPVVKIQP SKTLVGQPVG TKVATFSSRG 540
  541 PNSIAPAILK PDIAAPGVSI LAATTNTTFS DQGFIMLSGT SMAAPAISGV AALLKALHRD 600
  601 WSPAAIRSAI VTTAWKTDPF GEQIFAEGSP PKLADPFDYG GGLVNPEKSA NPGLVYDMGL 660
  661 EDYVLYMCSV GYNETSISQL IGKTTVCSNP KPSVLDFNLP SITIPNLKDE VTITRTVTNV 720
  721 GPLNSVYRVT VEPPLGFQVT VTPETLVFNS TTKKVYFKVK VSTTHKTNTG YYFGSLTWSD 780
  781 SLHNVTIPLS VRTQILQNYY DEN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle