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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CRK32_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCLQNLLSIL CFVLAISFGY VSAQKCVDSM FFRPNGTYDT NRHLILSNLA SNVSSRDGYY  60
   61 NGSVGEGPDR IYALGLCIPG TDPKVCDDCM QIASTGILQN CPNQTDSYDW RSQKTLCFVR 120
  121 YSNSSFFNKM DLEPTMVIGD LNSGLFQGDL AAYTRTWEEF MNSMITRVGR TRYLADISPR 180
  181 IGSARIYALM QCIRGISSME CETCIRDNVR MYQSCCNGFI GGTIRKPVCF FRWDGSEYLG 240
  241 AFGDTPSLPP PSPDGKTIST GAIVAVVVSV VIFVVLLALV LVIRKRRQSY KTLKPKTDDD 300
  301 MTSPQSLQFD FMTLEAATDK FSRNNKLGKG GFGEVYKGML PNETEVAVKR LSSNSGQGTQ 360
  361 EFKNEVVIVA KLQHKNLVRL LGFCLERDEQ ILVYEFVPNK SLNYFLFGNK QKHLLDPTKK 420
  421 SQLDWKRRYN IIGGITRGLL YLHQDSRLTI IHRDIKASNI LLDADMNPKI ADFGMARNFR 480
  481 VDQTEDNTRR VVGTFGYMPP EYVTHGQFST KSDVYSFGVL ILEIVCGKKN SSFYKIDDSG 540
  541 GNLVTHVWRL WNNDSPLDLI DPAIEESCDN DKVIRCIHIG LLCVQETPVD RPEMSTIFQM 600
  601 LTNSSITLPV PRPPGFFFRN RSNLDPLTYG SELGQSSSKS IPYTIDSASI TRVTPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle